Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nckap1P28660 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Nckap1P28660 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.67□□□□□ -0.38
Nckap1P28660 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.67□□□□□ -0.38
Nckap1P28660 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Nckap1P28660 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Gm27046-201ENSMUST00000182160 463 ntBASIC12.67□□□□□ -0.38
Nckap1P28660 Gm27023-201ENSMUST00000182372 285 ntBASIC12.67□□□□□ -0.38
Nckap1P28660 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.67□□□□□ -0.38
Nckap1P28660 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Gm5363-201ENSMUST00000211927 938 ntBASIC12.67□□□□□ -0.38
Nckap1P28660 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.67□□□□□ -0.38
Nckap1P28660 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.67□□□□□ -0.38
Nckap1P28660 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nckap1P28660 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.66□□□□□ -0.38
Nckap1P28660 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.66□□□□□ -0.38
Nckap1P28660 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nckap1P28660 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Nckap1P28660 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Gm37201-201ENSMUST00000191845 523 ntBASIC12.66□□□□□ -0.38
Nckap1P28660 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Nckap1P28660 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Nckap1P28660 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.66□□□□□ -0.38
Nckap1P28660 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.66□□□□□ -0.38
Nckap1P28660 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nckap1P28660 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nckap1P28660 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.66□□□□□ -0.38
Nckap1P28660 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.66□□□□□ -0.38
Nckap1P28660 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Nckap1P28660 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nckap1P28660 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nckap1P28660 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms