Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col2a1P28481 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm23596-201ENSMUST00000104304 132 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Gm23912-201ENSMUST00000104687 87 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm7722-201ENSMUST00000120646 741 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm43184-201ENSMUST00000197247 542 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Gm9555-201ENSMUST00000200908 583 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.22□□□□□ -0.13
Col2a1P28481 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col2a1P28481 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Gm11509-201ENSMUST00000117358 325 ntBASIC14.21□□□□□ -0.13
Col2a1P28481 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.21□□□□□ -0.13
Col2a1P28481 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col2a1P28481 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.21□□□□□ -0.13
Col2a1P28481 Mir7677-201ENSMUST00000184226 67 ntBASIC14.21□□□□□ -0.13
Col2a1P28481 Gm4482-201ENSMUST00000200876 742 ntBASIC14.21□□□□□ -0.13
Col2a1P28481 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Gm4607-201ENSMUST00000206649 577 ntBASIC14.21□□□□□ -0.13
Col2a1P28481 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col2a1P28481 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col2a1P28481 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col2a1P28481 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Col2a1P28481 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.21□□□□□ -0.14
Col2a1P28481 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Col2a1P28481 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col2a1P28481 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col2a1P28481 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Col2a1P28481 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col2a1P28481 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col2a1P28481 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col2a1P28481 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.2□□□□□ -0.14
Col2a1P28481 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Col2a1P28481 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Gm7851-201ENSMUST00000117574 323 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.2□□□□□ -0.14
Col2a1P28481 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Col2a1P28481 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col2a1P28481 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Col2a1P28481 Spcs1-203ENSMUST00000226374 592 ntBASIC14.2□□□□□ -0.14
Col2a1P28481 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms