Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.03□□□□□ -0.48
ApoeP08226 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ApoeP08226 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.03□□□□□ -0.48
ApoeP08226 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.03□□□□□ -0.48
ApoeP08226 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ApoeP08226 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Gm6458-201ENSMUST00000211573 635 ntBASIC12.03□□□□□ -0.48
ApoeP08226 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.03□□□□□ -0.48
ApoeP08226 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Gm20445-201ENSMUST00000061905 565 ntBASIC12.03□□□□□ -0.48
ApoeP08226 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ApoeP08226 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ApoeP08226 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ApoeP08226 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.02□□□□□ -0.48
ApoeP08226 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ApoeP08226 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.02□□□□□ -0.48
ApoeP08226 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ApoeP08226 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
ApoeP08226 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ApoeP08226 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ApoeP08226 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.02□□□□□ -0.49
ApoeP08226 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ApoeP08226 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ApoeP08226 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Gm16202-201ENSMUST00000117532 544 ntBASIC12.02□□□□□ -0.49
ApoeP08226 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.02□□□□□ -0.49
ApoeP08226 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ApoeP08226 Gm10576-201ENSMUST00000191927 825 ntBASIC12.02□□□□□ -0.49
ApoeP08226 Gm35960-201ENSMUST00000202712 767 ntBASIC12.02□□□□□ -0.49
ApoeP08226 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ApoeP08226 Gm8227-201ENSMUST00000223306 571 ntBASIC12.02□□□□□ -0.49
ApoeP08226 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ApoeP08226 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ApoeP08226 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ApoeP08226 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ApoeP08226 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.01□□□□□ -0.49
ApoeP08226 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Gm14350-201ENSMUST00000116642 640 ntBASIC12.01□□□□□ -0.49
ApoeP08226 Gm15371-201ENSMUST00000117057 784 ntBASIC12.01□□□□□ -0.49
ApoeP08226 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Gm44069-201ENSMUST00000204898 506 ntBASIC12.01□□□□□ -0.49
ApoeP08226 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.01□□□□□ -0.49
ApoeP08226 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ApoeP08226 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ApoeP08226 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ApoeP08226 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ApoeP08226 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ApoeP08226 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms