Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15□□□□□ -0.01
Col3a1P08121 Gm27627-201ENSMUST00000183644 150 ntBASIC15□□□□□ -0.01
Col3a1P08121 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15□□□□□ -0.01
Col3a1P08121 Gm5369-201ENSMUST00000217499 588 ntBASIC15□□□□□ -0.01
Col3a1P08121 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15□□□□□ -0.01
Col3a1P08121 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col3a1P08121 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col3a1P08121 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col3a1P08121 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15□□□□□ -0.01
Col3a1P08121 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col3a1P08121 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col3a1P08121 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col3a1P08121 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12616-201ENSMUST00000118594 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12624-201ENSMUST00000177615 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12621-201ENSMUST00000177760 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12615-201ENSMUST00000177970 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12622-201ENSMUST00000177975 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12627-201ENSMUST00000178412 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12625-201ENSMUST00000179122 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12614-201ENSMUST00000179586 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm12613-201ENSMUST00000180323 382 ntBASIC14.99□□□□□ -0.01
Col3a1P08121 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.99□□□□□ -0.01
Col3a1P08121 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col3a1P08121 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Col3a1P08121 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col3a1P08121 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.98□□□□□ -0.01
Col3a1P08121 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.98□□□□□ -0.01
Col3a1P08121 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.98□□□□□ -0.01
Col3a1P08121 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.98□□□□□ -0.01
Col3a1P08121 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.98□□□□□ -0.01
Col3a1P08121 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.98□□□□□ -0.01
Col3a1P08121 Mir7032-201ENSMUST00000185154 79 ntBASIC14.98□□□□□ -0.01
Col3a1P08121 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Col3a1P08121 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.98□□□□□ -0.01
Col3a1P08121 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.98□□□□□ -0.01
Col3a1P08121 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.98□□□□□ -0.01
Col3a1P08121 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.98□□□□□ -0.01
Col3a1P08121 Gm5455-201ENSMUST00000058710 715 ntBASIC14.98□□□□□ -0.01
Col3a1P08121 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.98□□□□□ -0.01
Col3a1P08121 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col3a1P08121 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col3a1P08121 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col3a1P08121 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.97□□□□□ -0.01
Col3a1P08121 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col3a1P08121 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col3a1P08121 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col3a1P08121 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.97□□□□□ -0.01
Col3a1P08121 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col3a1P08121 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col3a1P08121 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col3a1P08121 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Col3a1P08121 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 Gm15515-201ENSMUST00000117827 822 ntBASIC14.97□□□□□ -0.01
Col3a1P08121 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.97□□□□□ -0.01
Col3a1P08121 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col3a1P08121 Mir1943-201ENSMUST00000158276 73 ntBASIC14.97□□□□□ -0.01
Col3a1P08121 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms