Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.33□□□□□ -0.6
P06344 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.33□□□□□ -0.6
P06344 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
P06344 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.33□□□□□ -0.6
P06344 Gm14723-201ENSMUST00000118686 215 ntBASIC11.33□□□□□ -0.6
P06344 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.33□□□□□ -0.6
P06344 Mospd4-201ENSMUST00000180618 576 ntBASIC11.33□□□□□ -0.6
P06344 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P06344 Gm10608-202ENSMUST00000213924 676 ntBASIC11.33□□□□□ -0.6
P06344 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
P06344 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
P06344 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P06344 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P06344 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
P06344 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
P06344 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.33□□□□□ -0.6
P06344 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P06344 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.33□□□□□ -0.6
P06344 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.33□□□□□ -0.6
P06344 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P06344 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P06344 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P06344 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P06344 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.32□□□□□ -0.6
P06344 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.32□□□□□ -0.6
P06344 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P06344 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.32□□□□□ -0.6
P06344 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
P06344 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.32□□□□□ -0.6
P06344 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
P06344 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
P06344 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.32□□□□□ -0.6
P06344 Gm37489-201ENSMUST00000191883 159 ntBASIC11.32□□□□□ -0.6
P06344 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.32□□□□□ -0.6
P06344 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P06344 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.32□□□□□ -0.6
P06344 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.32□□□□□ -0.6
P06344 Gm9368-201ENSMUST00000219348 831 ntBASIC11.32□□□□□ -0.6
P06344 Gm7046-201ENSMUST00000221351 977 ntBASIC11.32□□□□□ -0.6
P06344 Cts7-204ENSMUST00000225321 1257 ntBASIC11.32□□□□□ -0.6
P06344 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.32□□□□□ -0.6
P06344 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P06344 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.32□□□□□ -0.6
P06344 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.32□□□□□ -0.6
P06344 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P06344 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
P06344 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P06344 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.31□□□□□ -0.6
P06344 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.31□□□□□ -0.6
P06344 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.31□□□□□ -0.6
P06344 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P06344 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P06344 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms