Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Stx1aO35526 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Stx1aO35526 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.26□□□□□ -0.13
Stx1aO35526 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Stx1aO35526 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Stx1aO35526 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Stx1aO35526 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Stx1aO35526 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Stx1aO35526 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.26□□□□□ -0.13
Stx1aO35526 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.25□□□□□ -0.13
Stx1aO35526 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Stx1aO35526 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.25□□□□□ -0.13
Stx1aO35526 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Stx1aO35526 Gm10576-201ENSMUST00000191927 825 ntBASIC14.25□□□□□ -0.13
Stx1aO35526 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Stx1aO35526 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Stx1aO35526 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.24□□□□□ -0.13
Stx1aO35526 Gm14921-201ENSMUST00000118643 908 ntBASIC14.24□□□□□ -0.13
Stx1aO35526 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.24□□□□□ -0.13
Stx1aO35526 Gm15429-201ENSMUST00000151268 798 ntBASIC14.24□□□□□ -0.13
Stx1aO35526 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.24□□□□□ -0.13
Stx1aO35526 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.24□□□□□ -0.13
Stx1aO35526 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.24□□□□□ -0.13
Stx1aO35526 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.24□□□□□ -0.13
Stx1aO35526 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Stx1aO35526 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Stx1aO35526 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.23□□□□□ -0.13
Stx1aO35526 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Stx1aO35526 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.23□□□□□ -0.13
Stx1aO35526 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.23□□□□□ -0.13
Stx1aO35526 Gm14760-201ENSMUST00000121831 999 ntBASIC14.23□□□□□ -0.13
Stx1aO35526 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Stx1aO35526 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Stx1aO35526 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms