Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Gm29127-201ENSMUST00000188304 517 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm32025-201ENSMUST00000217960 307 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Raet1aO08602 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Raet1aO08602 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Raet1aO08602 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Raet1aO08602 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.27□□□□□ -0.6
Raet1aO08602 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.27□□□□□ -0.6
Raet1aO08602 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.27□□□□□ -0.6
Raet1aO08602 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.27□□□□□ -0.6
Raet1aO08602 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.27□□□□□ -0.6
Raet1aO08602 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Raet1aO08602 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Raet1aO08602 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Raet1aO08602 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Raet1aO08602 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Raet1aO08602 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.27□□□□□ -0.61
Raet1aO08602 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Gm26927-201ENSMUST00000182385 965 ntBASIC11.27□□□□□ -0.61
Raet1aO08602 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.27□□□□□ -0.61
Raet1aO08602 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.27□□□□□ -0.61
Raet1aO08602 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.27□□□□□ -0.61
Raet1aO08602 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.27□□□□□ -0.61
Raet1aO08602 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Gm10268-201ENSMUST00000085340 555 ntBASIC11.27□□□□□ -0.61
Raet1aO08602 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Raet1aO08602 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Raet1aO08602 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Raet1aO08602 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.26□□□□□ -0.61
Raet1aO08602 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.26□□□□□ -0.61
Raet1aO08602 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Raet1aO08602 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms