Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.24□□□□□ -0.29
Scn1aA2APX8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Gm14999-201ENSMUST00000121039 624 ntBASIC13.24□□□□□ -0.29
Scn1aA2APX8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.24□□□□□ -0.29
Scn1aA2APX8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Gm44967-201ENSMUST00000207047 631 ntBASIC13.24□□□□□ -0.29
Scn1aA2APX8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.24□□□□□ -0.29
Scn1aA2APX8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.24□□□□□ -0.29
Scn1aA2APX8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn1aA2APX8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1aA2APX8 Mir877-201ENSMUST00000104738 85 ntBASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.23□□□□□ -0.29
Scn1aA2APX8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.23□□□□□ -0.29
Scn1aA2APX8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1aA2APX8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.22□□□□□ -0.29
Scn1aA2APX8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1aA2APX8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms