Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm2213-201ENSMUST00000197485 688 ntBASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk1bQ9Z2C6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gm14701-201ENSMUST00000117156 348 ntBASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gm16202-201ENSMUST00000117532 544 ntBASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.78□□□□□ -0.52
Upk1bQ9Z2C6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.77□□□□□ -0.52
Upk1bQ9Z2C6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Gm14350-201ENSMUST00000116642 640 ntBASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Gm43514-201ENSMUST00000198852 424 ntBASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms