Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim42Q9D2H5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Gm5867-201ENSMUST00000063197 592 ntBASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim42Q9D2H5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim42Q9D2H5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Gm23935-201ENSMUST00000102303 57 ntBASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Gm24270-201ENSMUST00000102326 57 ntBASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Gm24245-201ENSMUST00000157318 57 ntBASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Gm44124-201ENSMUST00000204159 472 ntBASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Chchd1-203ENSMUST00000224633 557 ntBASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim42Q9D2H5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms