Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm16476-201ENSMUST00000221544 139 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RTRAFQ9CQE8 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms