Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf111Q99ML9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.34□□□□□ -0.43
Rnf111Q99ML9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm16202-201ENSMUST00000117532 544 ntBASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.34□□□□□ -0.43
Rnf111Q99ML9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms