Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Tram1Q91V04 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.96□□□□□ -0.65
Tram1Q91V04 Gm44335-201ENSMUST00000196879 141 ntBASIC10.96□□□□□ -0.65
Tram1Q91V04 Gm44297-201ENSMUST00000198304 141 ntBASIC10.96□□□□□ -0.65
Tram1Q91V04 Gm44346-201ENSMUST00000198851 141 ntBASIC10.96□□□□□ -0.65
Tram1Q91V04 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.96□□□□□ -0.65
Tram1Q91V04 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.96□□□□□ -0.65
Tram1Q91V04 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.96□□□□□ -0.65
Tram1Q91V04 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tram1Q91V04 Gm26035-201ENSMUST00000083065 308 ntBASIC10.96□□□□□ -0.65
Tram1Q91V04 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.96□□□□□ -0.66
Tram1Q91V04 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Tram1Q91V04 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Tram1Q91V04 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Tram1Q91V04 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tram1Q91V04 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.95□□□□□ -0.66
Tram1Q91V04 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.95□□□□□ -0.66
Tram1Q91V04 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.95□□□□□ -0.66
Tram1Q91V04 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tram1Q91V04 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tram1Q91V04 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.94□□□□□ -0.66
Tram1Q91V04 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm6447-201ENSMUST00000118905 835 ntBASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm7774-201ENSMUST00000200064 533 ntBASIC10.94□□□□□ -0.66
Tram1Q91V04 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Tram1Q91V04 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm5779-201ENSMUST00000218467 910 ntBASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm8227-201ENSMUST00000223306 571 ntBASIC10.94□□□□□ -0.66
Tram1Q91V04 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tram1Q91V04 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tram1Q91V04 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms