Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm8712-201ENSMUST00000221090 701 ntBASIC13.6□□□□□ -0.23
TraipQ8VIG6 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.6□□□□□ -0.23
TraipQ8VIG6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.6□□□□□ -0.23
TraipQ8VIG6 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TraipQ8VIG6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.59□□□□□ -0.23
TraipQ8VIG6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Gm27046-201ENSMUST00000182160 463 ntBASIC13.59□□□□□ -0.23
TraipQ8VIG6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TraipQ8VIG6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TraipQ8VIG6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TraipQ8VIG6 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TraipQ8VIG6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
TraipQ8VIG6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.58□□□□□ -0.23
TraipQ8VIG6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
TraipQ8VIG6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TraipQ8VIG6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm13315-201ENSMUST00000120376 991 ntBASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm13570-201ENSMUST00000140763 309 ntBASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm40332-201ENSMUST00000199847 938 ntBASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TraipQ8VIG6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms