Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd2Q8VE28 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gm43118-201ENSMUST00000199149 775 ntBASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Snora73a-201ENSMUST00000082453 205 ntBASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkd2Q8VE28 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm11618-201ENSMUST00000117946 267 ntBASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm29608-201ENSMUST00000190444 463 ntBASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm9823-201ENSMUST00000051212 327 ntBASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.62□□□□□ -0.55
Nkd2Q8VE28 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkd2Q8VE28 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms