Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Gm43321-201ENSMUST00000198897 2409 ntBASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfwd3Q8CIK8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Snora78-201ENSMUST00000158630 128 ntBASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Gm19163-201ENSMUST00000223313 780 ntBASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfwd3Q8CIK8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm12291-201ENSMUST00000121627 311 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm22121-201ENSMUST00000175148 54 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Mir7085-201ENSMUST00000184353 66 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rfwd3Q8CIK8 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms