Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
Rab11fip3Q8CHD8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm11597-201ENSMUST00000121423 964 ntBASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm16570-201ENSMUST00000161951 436 ntBASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm18212-201ENSMUST00000211678 889 ntBASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rab11fip3Q8CHD8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Gm14832-201ENSMUST00000121289 322 ntBASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rab11fip3Q8CHD8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms