Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4Q8BQZ5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpsf4Q8BQZ5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Gm45784-201ENSMUST00000188360 142 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 AY702102-202ENSMUST00000194651 1173 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Gm44069-201ENSMUST00000204898 506 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Gm40466-201ENSMUST00000212174 422 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4Q8BQZ5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4Q8BQZ5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms