Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gm3671-201ENSMUST00000182463 1007 ntBASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 AC124457.1-201ENSMUST00000198845 120 ntBASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gm10288-201ENSMUST00000084614 537 ntBASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Mir6998-201ENSMUST00000183343 64 ntBASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 AC174797.2-202ENSMUST00000225729 568 ntBASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.37■□□□□ 0.21
Col16a1Q8BLX7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gm11451-201ENSMUST00000118946 630 ntBASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gm4726-201ENSMUST00000135604 736 ntBASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gm6019-201ENSMUST00000148369 736 ntBASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gm23771-201ENSMUST00000178702 110 ntBASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col16a1Q8BLX7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm11340-201ENSMUST00000119226 412 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm14585-201ENSMUST00000120713 634 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm14247-201ENSMUST00000120950 237 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Mir1956-201ENSMUST00000157748 65 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm25072-201ENSMUST00000175233 235 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 AC122408.1-201ENSMUST00000218949 218 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col16a1Q8BLX7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Gm16071-201ENSMUST00000119589 793 ntBASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col16a1Q8BLX7 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms