Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.31□□□□□ -0.28
Srrm3Q80WV7 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.31□□□□□ -0.28
Srrm3Q80WV7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Gm37466-201ENSMUST00000195692 652 ntBASIC13.3□□□□□ -0.28
Srrm3Q80WV7 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Srrm3Q80WV7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Gm15240-201ENSMUST00000118156 720 ntBASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.29□□□□□ -0.28
Srrm3Q80WV7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms