Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm15515-201ENSMUST00000117827 822 ntBASIC14.02□□□□□ -0.17
Ecm1Q61508 Gm9022-201ENSMUST00000182482 992 ntBASIC14.02□□□□□ -0.17
Ecm1Q61508 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.02□□□□□ -0.17
Ecm1Q61508 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Ecm1Q61508 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Gm5369-201ENSMUST00000217499 588 ntBASIC14.02□□□□□ -0.17
Ecm1Q61508 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.02□□□□□ -0.17
Ecm1Q61508 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.02□□□□□ -0.17
Ecm1Q61508 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.02□□□□□ -0.17
Ecm1Q61508 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ecm1Q61508 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm11989-201ENSMUST00000117240 672 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm11362-201ENSMUST00000118838 850 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm13408-201ENSMUST00000119822 798 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm13935-201ENSMUST00000121859 798 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ecm1Q61508 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.01□□□□□ -0.17
Ecm1Q61508 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Ecm1Q61508 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ecm1Q61508 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ecm1Q61508 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14□□□□□ -0.17
Ecm1Q61508 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ecm1Q61508 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
Ecm1Q61508 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14□□□□□ -0.17
Ecm1Q61508 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ecm1Q61508 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ecm1Q61508 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Gm24934-201ENSMUST00000103764 111 ntBASIC14□□□□□ -0.17
Ecm1Q61508 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14□□□□□ -0.17
Ecm1Q61508 Gm13045-201ENSMUST00000119019 712 ntBASIC14□□□□□ -0.17
Ecm1Q61508 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14□□□□□ -0.17
Ecm1Q61508 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ecm1Q61508 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14□□□□□ -0.17
Ecm1Q61508 Gm45770-201ENSMUST00000212105 616 ntBASIC14□□□□□ -0.17
Ecm1Q61508 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms