Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm9824-201ENSMUST00000178707 561 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm27390-201ENSMUST00000184516 176 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm18206-201ENSMUST00000207027 926 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 BC001981-202ENSMUST00000191393 1545 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav3-3Q5R1C3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gm15678-201ENSMUST00000117573 960 ntBASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gm27494-201ENSMUST00000184735 189 ntBASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 279.4 ms