Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.17■□□□□ 0.02
Rnf20Q5DTM8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gm12363-201ENSMUST00000122250 668 ntBASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gm7029-201ENSMUST00000173226 450 ntBASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf20Q5DTM8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Gm7063-201ENSMUST00000186840 981 ntBASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Gm43818-201ENSMUST00000200605 466 ntBASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Gm10268-201ENSMUST00000085340 555 ntBASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf20Q5DTM8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Gm16177-201ENSMUST00000120728 718 ntBASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Gm8602-201ENSMUST00000184045 607 ntBASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf20Q5DTM8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf20Q5DTM8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms