Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Urb1Q571H0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
Urb1Q571H0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Gm11667-201ENSMUST00000119828 486 ntBASIC11.73□□□□□ -0.53
Urb1Q571H0 Gm13875-201ENSMUST00000120162 282 ntBASIC11.73□□□□□ -0.53
Urb1Q571H0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Urb1Q571H0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.73□□□□□ -0.53
Urb1Q571H0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Gm5904-201ENSMUST00000210286 865 ntBASIC11.73□□□□□ -0.53
Urb1Q571H0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Urb1Q571H0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Urb1Q571H0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Urb1Q571H0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Urb1Q571H0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.72□□□□□ -0.53
Urb1Q571H0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.72□□□□□ -0.53
Urb1Q571H0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.72□□□□□ -0.53
Urb1Q571H0 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.72□□□□□ -0.53
Urb1Q571H0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.72□□□□□ -0.53
Urb1Q571H0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm27552-201ENSMUST00000183351 62 ntBASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm27844-201ENSMUST00000183613 62 ntBASIC11.72□□□□□ -0.53
Urb1Q571H0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.72□□□□□ -0.53
Urb1Q571H0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Urb1Q571H0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Urb1Q571H0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Urb1Q571H0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Urb1Q571H0 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.71□□□□□ -0.53
Urb1Q571H0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Gm15131-201ENSMUST00000119124 595 ntBASIC11.71□□□□□ -0.53
Urb1Q571H0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.71□□□□□ -0.53
Urb1Q571H0 Spcs1-203ENSMUST00000226374 592 ntBASIC11.71□□□□□ -0.53
Urb1Q571H0 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.71□□□□□ -0.53
Urb1Q571H0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Urb1Q571H0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.71□□□□□ -0.53
Urb1Q571H0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Urb1Q571H0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Urb1Q571H0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Urb1Q571H0 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.71□□□□□ -0.54
Urb1Q571H0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Urb1Q571H0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Urb1Q571H0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.71□□□□□ -0.54
Urb1Q571H0 Gm11628-201ENSMUST00000117568 171 ntBASIC11.71□□□□□ -0.54
Urb1Q571H0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Urb1Q571H0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.71□□□□□ -0.54
Urb1Q571H0 Gm19353-201ENSMUST00000184561 445 ntBASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms