Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.91□□□□□ -0.02
Col5a2Q3U962 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col5a2Q3U962 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm26286-201ENSMUST00000104166 134 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm16071-201ENSMUST00000119589 793 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm17826-201ENSMUST00000189720 798 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col5a2Q3U962 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.9□□□□□ -0.02
Col5a2Q3U962 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm12857-201ENSMUST00000117678 592 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm20392-201ENSMUST00000173047 701 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm37458-201ENSMUST00000194055 410 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm28388-201ENSMUST00000186262 437 ntBASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.89□□□□□ -0.03
Col5a2Q3U962 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.88□□□□□ -0.03
Col5a2Q3U962 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col5a2Q3U962 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.88□□□□□ -0.03
Col5a2Q3U962 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.88□□□□□ -0.03
Col5a2Q3U962 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col5a2Q3U962 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms