Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm45085-201ENSMUST00000209100 441 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Gm18499-201ENSMUST00000220808 1021 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC8.38□□□□□ -1.07
PrkdcP97313 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm10676-201ENSMUST00000098778 3221 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
PrkdcP97313 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm11783-201ENSMUST00000119549 885 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Gm14942-201ENSMUST00000119642 336 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm4868-201ENSMUST00000164138 789 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Gm38151-201ENSMUST00000195085 289 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC8.38□□□□□ -1.07
PrkdcP97313 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
PrkdcP97313 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC8.38□□□□□ -1.07
PrkdcP97313 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm11244-201ENSMUST00000121243 237 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 Gm25394-201ENSMUST00000157338 133 ntBASIC8.38□□□□□ -1.07
PrkdcP97313 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PrkdcP97313 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
PrkdcP97313 Gm16459-201ENSMUST00000121443 686 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PrkdcP97313 Gm4930-201ENSMUST00000219926 1087 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC8.37□□□□□ -1.07
PrkdcP97313 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PrkdcP97313 Gm19015-201ENSMUST00000184002 1189 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 CT030652.1-201ENSMUST00000227377 1235 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PrkdcP97313 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
PrkdcP97313 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 CT025610.1-201ENSMUST00000224552 1786 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PrkdcP97313 Gm23604-201ENSMUST00000104311 132 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Ighv1-70-201ENSMUST00000196509 351 ntBASIC8.37□□□□□ -1.07
PrkdcP97313 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PrkdcP97313 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC8.37□□□□□ -1.07
PrkdcP97313 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm24231-201ENSMUST00000104315 133 ntBASIC8.36□□□□□ -1.07
PrkdcP97313 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PrkdcP97313 Gm22388-201ENSMUST00000158194 248 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms