Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ybx1P62960 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.04□□□□□ -0.32
Ybx1P62960 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.03□□□□□ -0.32
Ybx1P62960 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Gm37986-201ENSMUST00000193285 383 ntBASIC13.03□□□□□ -0.32
Ybx1P62960 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.03□□□□□ -0.32
Ybx1P62960 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ybx1P62960 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ybx1P62960 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.02□□□□□ -0.32
Ybx1P62960 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ybx1P62960 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ybx1P62960 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Gm24845-201ENSMUST00000158034 109 ntBASIC13.02□□□□□ -0.33
Ybx1P62960 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Gm7003-201ENSMUST00000195089 312 ntBASIC13.02□□□□□ -0.33
Ybx1P62960 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.02□□□□□ -0.33
Ybx1P62960 Gzmn-202ENSMUST00000225535 989 ntBASIC13.02□□□□□ -0.33
Ybx1P62960 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.02□□□□□ -0.33
Ybx1P62960 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ybx1P62960 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ybx1P62960 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.01□□□□□ -0.33
Ybx1P62960 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm13996-201ENSMUST00000118456 430 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm8018-201ENSMUST00000173536 789 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm27023-201ENSMUST00000182372 285 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ybx1P62960 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Gm8913-201ENSMUST00000209491 641 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm18041-201ENSMUST00000218210 618 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms