Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Gm37986-201ENSMUST00000193285 383 ntBASIC17.06■□□□□ 0.32
Nphp4P59240 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC17.06■□□□□ 0.32
Nphp4P59240 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC17.06■□□□□ 0.32
Nphp4P59240 Dhrs4-202ENSMUST00000226168 828 ntBASIC17.06■□□□□ 0.32
Nphp4P59240 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nphp4P59240 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.06■□□□□ 0.32
Nphp4P59240 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.06■□□□□ 0.32
Nphp4P59240 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Gm9361-201ENSMUST00000198695 1507 ntBASIC17.06■□□□□ 0.32
Nphp4P59240 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nphp4P59240 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC17.06■□□□□ 0.32
Nphp4P59240 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nphp4P59240 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.05■□□□□ 0.32
Nphp4P59240 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nphp4P59240 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.05■□□□□ 0.32
Nphp4P59240 Gm17827-201ENSMUST00000211825 742 ntBASIC17.05■□□□□ 0.32
Nphp4P59240 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.05■□□□□ 0.32
Nphp4P59240 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nphp4P59240 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.05■□□□□ 0.32
Nphp4P59240 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Nphp4P59240 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nphp4P59240 AC126262.1-201ENSMUST00000221802 1904 ntBASIC17.05■□□□□ 0.32
Nphp4P59240 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
Nphp4P59240 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nphp4P59240 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Gm22133-201ENSMUST00000102082 109 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
Nphp4P59240 H2-Q3-201ENSMUST00000172583 608 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm34767-201ENSMUST00000191813 1062 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm9555-201ENSMUST00000200908 583 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC17.04■□□□□ 0.32
Nphp4P59240 Gm270-201ENSMUST00000223010 976 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nphp4P59240 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nphp4P59240 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Gm12164-201ENSMUST00000121695 551 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC17.04■□□□□ 0.32
Nphp4P59240 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nphp4P59240 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Nphp4P59240 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Gm43947-201ENSMUST00000203019 959 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm7207-201ENSMUST00000211575 1067 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nphp4P59240 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nphp4P59240 Gm10702-201ENSMUST00000098929 1268 ntBASIC17.04■□□□□ 0.32
Nphp4P59240 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nphp4P59240 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms