Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Hmga2P52927 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Hmga2P52927 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hmga2P52927 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.81□□□□□ -0.68
Hmga2P52927 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Gm43575-201ENSMUST00000196420 516 ntBASIC10.81□□□□□ -0.68
Hmga2P52927 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.81□□□□□ -0.68
Hmga2P52927 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hmga2P52927 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hmga2P52927 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.8□□□□□ -0.68
Hmga2P52927 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmga2P52927 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.8□□□□□ -0.68
Hmga2P52927 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.8□□□□□ -0.68
Hmga2P52927 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.8□□□□□ -0.68
Hmga2P52927 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmga2P52927 Gm44397-201ENSMUST00000195950 113 ntBASIC10.8□□□□□ -0.68
Hmga2P52927 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.8□□□□□ -0.68
Hmga2P52927 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.8□□□□□ -0.68
Hmga2P52927 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hmga2P52927 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.8□□□□□ -0.68
Hmga2P52927 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.8□□□□□ -0.68
Hmga2P52927 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hmga2P52927 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hmga2P52927 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.8□□□□□ -0.68
Hmga2P52927 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms