Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.02□□□□□ -0.33
ClgnP52194 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
ClgnP52194 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.02□□□□□ -0.33
ClgnP52194 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.02□□□□□ -0.33
ClgnP52194 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ClgnP52194 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
ClgnP52194 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.01□□□□□ -0.33
ClgnP52194 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.01□□□□□ -0.33
ClgnP52194 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.01□□□□□ -0.33
ClgnP52194 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.01□□□□□ -0.33
ClgnP52194 Gm27486-201ENSMUST00000184923 80 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.01□□□□□ -0.33
ClgnP52194 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.01□□□□□ -0.33
ClgnP52194 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.01□□□□□ -0.33
ClgnP52194 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.01□□□□□ -0.33
ClgnP52194 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ClgnP52194 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.01□□□□□ -0.33
ClgnP52194 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.01□□□□□ -0.33
ClgnP52194 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.01□□□□□ -0.33
ClgnP52194 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.01□□□□□ -0.33
ClgnP52194 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ClgnP52194 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
ClgnP52194 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13□□□□□ -0.33
ClgnP52194 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ClgnP52194 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13□□□□□ -0.33
ClgnP52194 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13□□□□□ -0.33
ClgnP52194 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ClgnP52194 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ClgnP52194 Gm37922-201ENSMUST00000195596 455 ntBASIC13□□□□□ -0.33
ClgnP52194 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Gm10012-201ENSMUST00000078252 192 ntBASIC13□□□□□ -0.33
ClgnP52194 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ClgnP52194 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms