Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox18P43680 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.32□□□□□ -0.44
Sox18P43680 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Gm13255-201ENSMUST00000117255 547 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox18P43680 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox18P43680 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Gm17040-202ENSMUST00000170597 889 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox18P43680 Gm25025-201ENSMUST00000175018 111 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Gm19459-201ENSMUST00000176240 835 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox18P43680 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox18P43680 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Gm8913-201ENSMUST00000209491 641 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Gm5904-201ENSMUST00000210286 865 ntBASIC12.32□□□□□ -0.44
Sox18P43680 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.32□□□□□ -0.44
Sox18P43680 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox18P43680 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox18P43680 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox18P43680 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox18P43680 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox18P43680 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox18P43680 Gm11667-201ENSMUST00000119828 486 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Gm16420-201ENSMUST00000120258 856 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Gm12266-201ENSMUST00000120311 962 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Gm16397-201ENSMUST00000122201 494 ntBASIC12.31□□□□□ -0.44
Sox18P43680 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Gm38247-201ENSMUST00000194675 433 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox18P43680 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox18P43680 Gm10752-201ENSMUST00000218348 729 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Gm8712-201ENSMUST00000221090 701 ntBASIC12.31□□□□□ -0.44
Sox18P43680 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.31□□□□□ -0.44
Sox18P43680 AC162940.1-201ENSMUST00000224745 1167 ntBASIC12.31□□□□□ -0.44
Sox18P43680 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox18P43680 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sox18P43680 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Sox18P43680 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox18P43680 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms