Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.55□□□□□ -0.4
Cd9P40240 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cd9P40240 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.55□□□□□ -0.4
Cd9P40240 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.55□□□□□ -0.4
Cd9P40240 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cd9P40240 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd9P40240 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cd9P40240 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cd9P40240 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cd9P40240 Gm13226-201ENSMUST00000117838 404 ntBASIC12.54□□□□□ -0.4
Cd9P40240 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.54□□□□□ -0.4
Cd9P40240 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.54□□□□□ -0.4
Cd9P40240 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Gm27731-201ENSMUST00000185192 107 ntBASIC12.54□□□□□ -0.4
Cd9P40240 Gm7063-201ENSMUST00000186840 981 ntBASIC12.54□□□□□ -0.4
Cd9P40240 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.54□□□□□ -0.4
Cd9P40240 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd9P40240 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cd9P40240 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.54□□□□□ -0.4
Cd9P40240 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.54□□□□□ -0.4
Cd9P40240 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd9P40240 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.54□□□□□ -0.4
Cd9P40240 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cd9P40240 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.53□□□□□ -0.4
Cd9P40240 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cd9P40240 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.53□□□□□ -0.4
Cd9P40240 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.53□□□□□ -0.4
Cd9P40240 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Gm3890-201ENSMUST00000182416 207 ntBASIC12.53□□□□□ -0.4
Cd9P40240 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.53□□□□□ -0.4
Cd9P40240 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cd9P40240 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cd9P40240 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.53□□□□□ -0.4
Cd9P40240 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cd9P40240 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cd9P40240 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cd9P40240 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cd9P40240 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
Cd9P40240 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.52□□□□□ -0.4
Cd9P40240 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd9P40240 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cd9P40240 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cd9P40240 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd9P40240 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd9P40240 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cd9P40240 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms