Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.62□□□□□ -0.71
Col8a2P25318 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.62□□□□□ -0.71
Col8a2P25318 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Col8a2P25318 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Col8a2P25318 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Col8a2P25318 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
Col8a2P25318 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.61□□□□□ -0.71
Col8a2P25318 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Col8a2P25318 Gm2546-201ENSMUST00000182630 991 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 Gm8099-201ENSMUST00000200510 742 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Col8a2P25318 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Col8a2P25318 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.61□□□□□ -0.71
Col8a2P25318 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Col8a2P25318 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Col8a2P25318 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.61□□□□□ -0.71
Col8a2P25318 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Col8a2P25318 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Col8a2P25318 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Col8a2P25318 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Col8a2P25318 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.6□□□□□ -0.71
Col8a2P25318 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Col8a2P25318 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Col8a2P25318 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.6□□□□□ -0.71
Col8a2P25318 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.6□□□□□ -0.71
Col8a2P25318 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.6□□□□□ -0.71
Col8a2P25318 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.6□□□□□ -0.71
Col8a2P25318 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Col8a2P25318 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.6□□□□□ -0.71
Col8a2P25318 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.6□□□□□ -0.71
Col8a2P25318 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms