Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.09□□□□□ -0.15
Hoxc6P10629 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.09□□□□□ -0.15
Hoxc6P10629 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxc6P10629 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc6P10629 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc6P10629 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.09□□□□□ -0.15
Hoxc6P10629 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc6P10629 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Hoxc6P10629 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc6P10629 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc6P10629 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Gm11450-201ENSMUST00000121144 333 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 Gm27627-201ENSMUST00000183644 150 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Grk6-205ENSMUST00000224653 2976 ntBASIC14.08□□□□□ -0.16
Hoxc6P10629 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc6P10629 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc6P10629 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc6P10629 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm13045-201ENSMUST00000119019 712 ntBASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm15703-201ENSMUST00000120250 880 ntBASIC14.07□□□□□ -0.16
Hoxc6P10629 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm11597-201ENSMUST00000121423 964 ntBASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm9555-201ENSMUST00000200908 583 ntBASIC14.07□□□□□ -0.16
Hoxc6P10629 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc6P10629 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.07□□□□□ -0.16
Hoxc6P10629 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc6P10629 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Hoxc6P10629 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.06□□□□□ -0.16
Hoxc6P10629 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc6P10629 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc6P10629 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms