Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
IghmP01872 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
IghmP01872 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.91□□□□□ -0.5
IghmP01872 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.91□□□□□ -0.5
IghmP01872 Gm12363-201ENSMUST00000122250 668 ntBASIC11.91□□□□□ -0.5
IghmP01872 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.91□□□□□ -0.5
IghmP01872 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
IghmP01872 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.91□□□□□ -0.5
IghmP01872 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
IghmP01872 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.91□□□□□ -0.5
IghmP01872 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
IghmP01872 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
IghmP01872 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
IghmP01872 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
IghmP01872 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.91□□□□□ -0.5
IghmP01872 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
IghmP01872 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
IghmP01872 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
IghmP01872 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.91□□□□□ -0.5
IghmP01872 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
IghmP01872 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
IghmP01872 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Pck2-205ENSMUST00000226352 2784 ntBASIC11.9□□□□□ -0.5
IghmP01872 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
IghmP01872 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.9□□□□□ -0.5
IghmP01872 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.9□□□□□ -0.5
IghmP01872 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.9□□□□□ -0.5
IghmP01872 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.9□□□□□ -0.5
IghmP01872 Gm12138-201ENSMUST00000122180 951 ntBASIC11.9□□□□□ -0.5
IghmP01872 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.9□□□□□ -0.5
IghmP01872 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.9□□□□□ -0.5
IghmP01872 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.9□□□□□ -0.5
IghmP01872 Gm4271-201ENSMUST00000174444 973 ntBASIC11.9□□□□□ -0.5
IghmP01872 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Gm27892-201ENSMUST00000185017 106 ntBASIC11.9□□□□□ -0.5
IghmP01872 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.9□□□□□ -0.5
IghmP01872 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.9□□□□□ -0.5
IghmP01872 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.9□□□□□ -0.5
IghmP01872 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.9□□□□□ -0.5
IghmP01872 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IghmP01872 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
IghmP01872 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
IghmP01872 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
IghmP01872 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
IghmP01872 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
IghmP01872 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
IghmP01872 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IghmP01872 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms