Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Mir449b-201ENSMUST00000104833 80 ntBASIC9.3□□□□□ -0.92
TcraP01849 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.3□□□□□ -0.92
TcraP01849 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.3□□□□□ -0.92
TcraP01849 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Gm37935-201ENSMUST00000192012 982 ntBASIC9.3□□□□□ -0.92
TcraP01849 Gm33320-201ENSMUST00000192232 530 ntBASIC9.3□□□□□ -0.92
TcraP01849 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
TcraP01849 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
TcraP01849 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
TcraP01849 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
TcraP01849 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
TcraP01849 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.3□□□□□ -0.92
TcraP01849 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
TcraP01849 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Gm6415-201ENSMUST00000118488 348 ntBASIC9.29□□□□□ -0.92
TcraP01849 Gm15653-201ENSMUST00000119247 907 ntBASIC9.29□□□□□ -0.92
TcraP01849 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.29□□□□□ -0.92
TcraP01849 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.29□□□□□ -0.92
TcraP01849 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
TcraP01849 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.29□□□□□ -0.92
TcraP01849 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.29□□□□□ -0.92
TcraP01849 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
TcraP01849 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
TcraP01849 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms