Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Gm27552-201ENSMUST00000183351 62 ntBASIC11.2□□□□□ -0.62
NgfP01139 Gm27844-201ENSMUST00000183613 62 ntBASIC11.2□□□□□ -0.62
NgfP01139 Gm18304-201ENSMUST00000189162 546 ntBASIC11.2□□□□□ -0.62
NgfP01139 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
NgfP01139 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
NgfP01139 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
NgfP01139 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.2□□□□□ -0.62
NgfP01139 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NgfP01139 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.19□□□□□ -0.62
NgfP01139 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.19□□□□□ -0.62
NgfP01139 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.19□□□□□ -0.62
NgfP01139 Gm29615-201ENSMUST00000185371 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28224-201ENSMUST00000186078 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm29001-201ENSMUST00000186177 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28292-201ENSMUST00000186593 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28101-201ENSMUST00000187608 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm29076-201ENSMUST00000187689 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28302-201ENSMUST00000187931 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28646-201ENSMUST00000188220 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28205-201ENSMUST00000189177 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm29032-201ENSMUST00000189797 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm28695-201ENSMUST00000190300 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 Gm37448-201ENSMUST00000192795 697 ntBASIC11.19□□□□□ -0.62
NgfP01139 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.19□□□□□ -0.62
NgfP01139 AY036118-201ENSMUST00000200021 923 ntBASIC11.19□□□□□ -0.62
NgfP01139 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NgfP01139 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.19□□□□□ -0.62
NgfP01139 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NgfP01139 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.18□□□□□ -0.62
NgfP01139 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
NgfP01139 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
NgfP01139 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
NgfP01139 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.18□□□□□ -0.62
NgfP01139 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.18□□□□□ -0.62
NgfP01139 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
NgfP01139 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Gm11331-201ENSMUST00000119764 288 ntBASIC11.18□□□□□ -0.62
NgfP01139 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NgfP01139 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NgfP01139 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
NgfP01139 Gm19994-201ENSMUST00000217086 586 ntBASIC11.18□□□□□ -0.62
NgfP01139 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.18□□□□□ -0.62
NgfP01139 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.18□□□□□ -0.62
NgfP01139 Gm9996-201ENSMUST00000070359 913 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms