Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Syn1O88935 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Syn1O88935 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.1□□□□□ -0.31
Syn1O88935 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.1□□□□□ -0.31
Syn1O88935 Gm37246-201ENSMUST00000192665 835 ntBASIC13.1□□□□□ -0.31
Syn1O88935 Gm38092-201ENSMUST00000195600 653 ntBASIC13.1□□□□□ -0.31
Syn1O88935 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Syn1O88935 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Syn1O88935 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.1□□□□□ -0.31
Syn1O88935 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Syn1O88935 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.09□□□□□ -0.31
Syn1O88935 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Syn1O88935 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Syn1O88935 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Syn1O88935 Gm23251-201ENSMUST00000103773 110 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Syn1O88935 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Syn1O88935 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.09□□□□□ -0.31
Syn1O88935 Gm13035-201ENSMUST00000117496 342 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Gm13736-201ENSMUST00000119272 253 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Syn1O88935 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.09□□□□□ -0.31
Syn1O88935 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Syn1O88935 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Syn1O88935 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Mir6546-201ENSMUST00000184460 62 ntBASIC13.09□□□□□ -0.31
Syn1O88935 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Syn1O88935 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.09□□□□□ -0.31
Syn1O88935 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Syn1O88935 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Syn1O88935 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Syn1O88935 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms