Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hcn1O88704 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Hcn1O88704 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.21□□□□□ -0.45
Hcn1O88704 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hcn1O88704 Gm12203-201ENSMUST00000118235 598 ntBASIC12.21□□□□□ -0.45
Hcn1O88704 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.21□□□□□ -0.45
Hcn1O88704 Gm12209-201ENSMUST00000120089 596 ntBASIC12.21□□□□□ -0.45
Hcn1O88704 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.21□□□□□ -0.45
Hcn1O88704 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.21□□□□□ -0.45
Hcn1O88704 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Gm29127-201ENSMUST00000188304 517 ntBASIC12.21□□□□□ -0.45
Hcn1O88704 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.21□□□□□ -0.45
Hcn1O88704 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.21□□□□□ -0.45
Hcn1O88704 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.21□□□□□ -0.45
Hcn1O88704 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.21□□□□□ -0.45
Hcn1O88704 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hcn1O88704 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Hcn1O88704 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hcn1O88704 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hcn1O88704 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hcn1O88704 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.2□□□□□ -0.46
Hcn1O88704 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm11425-201ENSMUST00000119608 498 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.2□□□□□ -0.46
Hcn1O88704 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm18062-201ENSMUST00000208020 547 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 Gm18055-201ENSMUST00000208254 547 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm9396-201ENSMUST00000076703 567 ntBASIC12.2□□□□□ -0.46
Hcn1O88704 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hcn1O88704 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms