Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.26□□□□□ -0.29
Ttc3O88196 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ttc3O88196 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ttc3O88196 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Ttc3O88196 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm23119-201ENSMUST00000158610 140 ntBASIC13.25□□□□□ -0.29
Ttc3O88196 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.25□□□□□ -0.29
Ttc3O88196 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.25□□□□□ -0.29
Ttc3O88196 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ttc3O88196 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Ttc3O88196 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.25□□□□□ -0.29
Ttc3O88196 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ttc3O88196 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.25□□□□□ -0.29
Ttc3O88196 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm9996-201ENSMUST00000070359 913 ntBASIC13.25□□□□□ -0.29
Ttc3O88196 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ttc3O88196 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ttc3O88196 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ttc3O88196 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.24□□□□□ -0.29
Ttc3O88196 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ttc3O88196 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.24□□□□□ -0.29
Ttc3O88196 Gm37666-201ENSMUST00000194110 866 ntBASIC13.24□□□□□ -0.29
Ttc3O88196 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.24□□□□□ -0.29
Ttc3O88196 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ttc3O88196 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.24□□□□□ -0.29
Ttc3O88196 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ttc3O88196 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ttc3O88196 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ttc3O88196 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ttc3O88196 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.23□□□□□ -0.29
Ttc3O88196 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.23□□□□□ -0.29
Ttc3O88196 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.23□□□□□ -0.29
Ttc3O88196 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ttc3O88196 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms