Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.87□□□□□ -0.99
Vamp8O70404 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.87□□□□□ -0.99
Vamp8O70404 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC8.87□□□□□ -0.99
Vamp8O70404 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC8.87□□□□□ -0.99
Vamp8O70404 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC8.87□□□□□ -0.99
Vamp8O70404 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Vamp8O70404 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC8.87□□□□□ -0.99
Vamp8O70404 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 AC159301.1-201ENSMUST00000225130 1182 ntBASIC8.87□□□□□ -0.99
Vamp8O70404 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Vamp8O70404 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Vamp8O70404 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Vamp8O70404 AC130671.2-201ENSMUST00000227224 1621 ntBASIC8.87□□□□□ -0.99
Vamp8O70404 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vamp8O70404 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC8.86□□□□□ -0.99
Vamp8O70404 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Vamp8O70404 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm6161-201ENSMUST00000121942 1102 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC8.86□□□□□ -0.99
Vamp8O70404 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC8.86□□□□□ -0.99
Vamp8O70404 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm6254-201ENSMUST00000168178 1072 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Gm6153-201ENSMUST00000172004 1058 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm5641-202ENSMUST00000198699 1080 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 AC160338.1-201ENSMUST00000214232 705 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 CT573086.1-201ENSMUST00000227202 1074 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Vamp8O70404 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vamp8O70404 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8.86□□□□□ -0.99
Vamp8O70404 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.86□□□□□ -0.99
Vamp8O70404 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm13410-201ENSMUST00000117058 1415 ntBASIC8.86□□□□□ -0.99
Vamp8O70404 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.86□□□□□ -0.99
Vamp8O70404 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vamp8O70404 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms