Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1aO08602 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.3□□□□□ -0.6
Raet1aO08602 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.3□□□□□ -0.6
Raet1aO08602 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Raet1aO08602 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Gm4984-201ENSMUST00000115987 360 ntBASIC11.3□□□□□ -0.6
Raet1aO08602 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1aO08602 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1aO08602 Gm7029-201ENSMUST00000173226 450 ntBASIC11.3□□□□□ -0.6
Raet1aO08602 Gm4768-201ENSMUST00000206199 686 ntBASIC11.3□□□□□ -0.6
Raet1aO08602 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Raet1aO08602 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.3□□□□□ -0.6
Raet1aO08602 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Raet1aO08602 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Raet1aO08602 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.3□□□□□ -0.6
Raet1aO08602 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Raet1aO08602 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.29□□□□□ -0.6
Raet1aO08602 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Raet1aO08602 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.29□□□□□ -0.6
Raet1aO08602 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.29□□□□□ -0.6
Raet1aO08602 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Raet1aO08602 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.29□□□□□ -0.6
Raet1aO08602 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Raet1aO08602 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.29□□□□□ -0.6
Raet1aO08602 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.29□□□□□ -0.6
Raet1aO08602 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Raet1aO08602 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.29□□□□□ -0.6
Raet1aO08602 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Raet1aO08602 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Raet1aO08602 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Raet1aO08602 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Raet1aO08602 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Raet1aO08602 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.28□□□□□ -0.6
Raet1aO08602 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm12390-201ENSMUST00000117897 397 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Gm16177-201ENSMUST00000120728 718 ntBASIC11.28□□□□□ -0.6
Raet1aO08602 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.28□□□□□ -0.6
Raet1aO08602 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.28□□□□□ -0.6
Raet1aO08602 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Raet1aO08602 Gm8602-201ENSMUST00000184045 607 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms