Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm25668-201ENSMUST00000157700 129 ntBASIC12.46□□□□□ -0.41
Chd3B1AR17 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Chd3B1AR17 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd3B1AR17 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd3B1AR17 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd3B1AR17 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chd3B1AR17 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Gm11439-201ENSMUST00000118598 409 ntBASIC12.46□□□□□ -0.42
Chd3B1AR17 Gm9083-201ENSMUST00000120423 819 ntBASIC12.46□□□□□ -0.42
Chd3B1AR17 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.46□□□□□ -0.42
Chd3B1AR17 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.46□□□□□ -0.42
Chd3B1AR17 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.46□□□□□ -0.42
Chd3B1AR17 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chd3B1AR17 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Chd3B1AR17 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.45□□□□□ -0.42
Chd3B1AR17 Gm29199-201ENSMUST00000187766 775 ntBASIC12.45□□□□□ -0.42
Chd3B1AR17 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.45□□□□□ -0.42
Chd3B1AR17 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.45□□□□□ -0.42
Chd3B1AR17 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chd3B1AR17 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chd3B1AR17 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.45□□□□□ -0.42
Chd3B1AR17 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chd3B1AR17 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.45□□□□□ -0.42
Chd3B1AR17 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm11531-201ENSMUST00000117614 555 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm18056-201ENSMUST00000207670 568 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm18061-201ENSMUST00000208350 562 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm18063-201ENSMUST00000208529 568 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm18052-201ENSMUST00000208750 559 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.44□□□□□ -0.42
Chd3B1AR17 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.44□□□□□ -0.42
Chd3B1AR17 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Chd3B1AR17 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chd3B1AR17 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms