Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.27□□□□□ -0.28
Scn1aA2APX8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.27□□□□□ -0.29
Scn1aA2APX8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.27□□□□□ -0.29
Scn1aA2APX8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Gm44958-201ENSMUST00000203734 736 ntBASIC13.27□□□□□ -0.29
Scn1aA2APX8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.27□□□□□ -0.29
Scn1aA2APX8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.27□□□□□ -0.29
Scn1aA2APX8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn1aA2APX8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.26□□□□□ -0.29
Scn1aA2APX8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn1aA2APX8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gm14130-201ENSMUST00000118417 987 ntBASIC13.26□□□□□ -0.29
Scn1aA2APX8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gm25668-201ENSMUST00000157700 129 ntBASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.26□□□□□ -0.29
Scn1aA2APX8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn1aA2APX8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.25□□□□□ -0.29
Scn1aA2APX8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.25□□□□□ -0.29
Scn1aA2APX8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm25700-201ENSMUST00000177693 110 ntBASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.25□□□□□ -0.29
Scn1aA2APX8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scn1aA2APX8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms