Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm2420-202ENSMUST00000202224 2249 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm6655-201ENSMUST00000201932 1309 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Ighv4-2-201ENSMUST00000192975 362 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm44658-201ENSMUST00000207965 637 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm38348-201ENSMUST00000191718 2273 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm20493-201ENSMUST00000173706 213 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm6859-201ENSMUST00000218614 989 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC6.52□□□□□ -1.37
Ubr4A2AN08 CT009509.1-201ENSMUST00000223855 466 ntBASIC6.52□□□□□ -1.37
Ubr4A2AN08 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ubr4A2AN08 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 AC124772.3-201ENSMUST00000222535 575 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm28182-201ENSMUST00000188354 2477 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm37014-201ENSMUST00000194723 2253 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm14752-201ENSMUST00000120719 2075 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm14052-201ENSMUST00000121434 1031 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 AC164614.1-201ENSMUST00000216038 397 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Ap5m1-205ENSMUST00000227431 3757 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm13910-201ENSMUST00000121752 1428 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm11996-201ENSMUST00000117538 915 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm12314-201ENSMUST00000118104 538 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm14942-201ENSMUST00000119642 336 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm24844-201ENSMUST00000158679 127 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC6.51□□□□□ -1.37
Ubr4A2AN08 Gm2445-201ENSMUST00000182798 989 ntBASIC6.51□□□□□ -1.37
Ubr4A2AN08 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms