Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Syt7-204ENSMUST00000223586 1344 ntBASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav12d-1A0N8R0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Gm10576-201ENSMUST00000191927 825 ntBASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav12d-1A0N8R0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Gm8227-201ENSMUST00000223306 571 ntBASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav12d-1A0N8R0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms