Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm11814-201ENSMUST00000119515 929 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm16479-201ENSMUST00000121706 932 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm11424-201ENSMUST00000121929 829 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm22331-201ENSMUST00000158066 136 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm10146-201ENSMUST00000072739 309 ntBASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav9n-2A0A0G2JDP3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms