Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav7n-4A0A075B620 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gm12585-201ENSMUST00000117307 290 ntBASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav7n-4A0A075B620 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm25287-201ENSMUST00000103846 110 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm22918-201ENSMUST00000103855 110 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Mir3113-201ENSMUST00000175478 76 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm42599-201ENSMUST00000201308 469 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Gm24447-201ENSMUST00000083977 338 ntBASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav7n-4A0A075B620 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms