Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcb1Q9Z0H3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm8885-201ENSMUST00000189382 598 ntBASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smarcb1Q9Z0H3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm13570-201ENSMUST00000140763 309 ntBASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.21□□□□□ -0.29
Smarcb1Q9Z0H3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcb1Q9Z0H3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcb1Q9Z0H3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcb1Q9Z0H3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smarcb1Q9Z0H3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smarcb1Q9Z0H3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms