Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn8aQ9WTU3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm25668-201ENSMUST00000157700 129 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm2383-201ENSMUST00000181461 807 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Rprl1-202ENSMUST00000198476 238 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scn8aQ9WTU3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn8aQ9WTU3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms